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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022740525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 389aa MW: 44485.1 Da PI: 6.6369 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.3 | 2.5e-15 | 69 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022740525.1 69 SRFRGVSRHRWTGRYEAHLWDkLSWnFTqkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 128 789******************888862256447*************************98 PP | |||||||
2 | AP2 | 52.9 | 8.9e-17 | 171 | 222 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_022740525.1 171 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 222 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence |
MEMTMVKDEQ CLGRRRMCSA DGEVQAVRCV KRRRRDPASV ALGCDDNQDQ QRQQQNEQTN 60 GATTVKRSSR FRGVSRHRWT GRYEAHLWDK LSWNFTQKKK GKQVYLGAYD DEEAAARAYD 120 LAALKYWGTS TFTNFPISDY EKEIEIMQTV TKEEYLASLR RKSSGFSRGV SKYRGVARHH 180 HNGRWEARIG RVFGNKYLYL GTYSTQEEAA RAYDIAAIEY RGTNAVTNFD LSTYFRWLKP 240 GTNNLVAANE SLAMTEPESL QLTSSYSPRE ESKPSFHHSF ATDYLNSPQK QEVLETKLPF 300 NSYNKSSSSP TALGLLLRSS IFQELVEKNA NVSEDESSTD TVDESKNQQA GSDDEFSGLF 360 YDETYDFPFI CSSGQDNIEL QERAFPLSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 35 | RRRMCSADGEVQAVRCVKRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 7e-81 | AP2 family protein |