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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022740265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 511aa MW: 56396.2 Da PI: 6.2682 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.5 | 4.3e-15 | 227 | 286 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022740265.1 227 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 286 57*******************666664478446*************************98 PP | |||||||
2 | AP2 | 49.8 | 8.5e-16 | 329 | 380 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022740265.1 329 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 380 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 511 aa Download sequence |
MASASNWLSF SLSTMEMLRS SSEPQFVSYE GSSSAVSPHY LIDNFYANGW TNPKHQVFFT 60 EGEENQSNEA QPPAMADESP ILTSFHQQAP KLEDFLGDSS SIVRYSDSQT ETQDSSLTQI 120 YDHSGSAYFN EHQDLKAITG FQAFSTNSGS EVDDSASMGR THSTAVEFPG HSIESSGTEL 180 GFSNCPTAGA LSLGVNQSCE NNNNKAIVSV DSDCSKKIAD TFGQRTSIYR GVTRHRWTGR 240 YEAHLWDNSC RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT TNFLISNYSK 300 ELEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT 360 FATEEEAAEA YDIAAIKFRG VNAVTNFEMN RYDVEAIAKS SLPIGGAAKR LKLSLETEQK 420 PIVNHEQQPH SSFNSNSISS APMQPISAIP CGIPFDSAAA AAFYQQNLYH HLQTANIGIS 480 DPPGSSSTMA TPMTVMSQPA AEFFFWPHQS Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.2 | 0.0 | AP2 family protein |