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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022739532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 673aa MW: 75065.2 Da PI: 7.1565 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.9e-16 | 323 | 382 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022739532.1 323 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 382 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.6 | 1.7e-14 | 427 | 476 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022739532.1 427 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 476 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 673 aa Download sequence |
MKSMSNDDNN NNNSNNTNWL GFSLSPHLKM EVSNQDPHHH TQSASDAAGV TTAVPASFFQ 60 SPSHLNYGLY YGVEGENGGL YSHFPVMPLK SDGSLCLMEA LGRSQPQAMV PTSTPKLEDF 120 FGGAAMGAHH YESSDREAMA LSLDSMYYHQ NPNQEHNNQN CLEHLQQSSR QQHQQQFQVQ 180 QYQYHSGYRN QEMLLGEEAK EAHLTDCNLQ LPTMANDGAP GMKHWVSRNY STEHAMHHKM 240 IGRMGDNGAE SGFIGAMAYG DLQSLSLSMS PGSQSSCVTG SQQISPTATD YAAMQTKKRG 300 PEKVDQKQIV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQVYL 360 GGYDMEEKAA RAYDLAALKY WGPSTHINFS LENYQKELEE MKNMTRQEYV AHLRRKSSGF 420 SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV 480 TNFDITRYAV ERIMASNTLL TGELARRNKD IAPGNDAISH NLLTDNSNGE TNISPKNNEV 540 QPDWKMVLYQ SSEQQLEQKQ PNIIDSYKTQ TFSLAPENMV GIDTISSGQR EVDDSSKIGT 600 HLSNASSLVT SLSSSREGSP DRSSLPMPFA MPPPSSKLFT SSANTVNSWI PSAQLRPALS 660 MPHMPVFAAW TDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-133 | AP2 family protein |