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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022730578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 559aa MW: 61022.8 Da PI: 8.3015 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.9 | 3.3e-15 | 183 | 242 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022730578.1 183 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 242 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.1 | 6e-15 | 285 | 336 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022730578.1 285 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 336 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 559 aa Download sequence |
MDMNMGNMDS SSTRNWIAFS LSKHQQHLNL PSSSSHLCLY ETFTSSTTTT TAPTTTNSSA 60 AAEEDAGAGT IAGATDSSMF NGGTKLEDFL GGSSTTTGVG GVPLPQLPRH HQFSTETPVT 120 ISDNELYDSE LKTIAASFLR GFSSEQTDTH KQQQQQQLRQ HQQMPKAEPS PRGAVDTFGQ 180 RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QSRKGRQVYL GGYDKEEKAA RAYDLAALKY 240 WGPTTTTNFP IFNYEKELEE MKNMTRQEFV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ 300 ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KSIANSNLPI 360 GGLSNKSRNC SDSASDSKST DDDRDHSSAS SAVTFASQPA ASSTLSFAIP IKQDPSDYWS 420 NIMGYNNTAV FLSNGKNPSV APTNFFHQSS NNGSGFQSPS GFSMDFGGNS AVNGSINNGF 480 FSGGGCVQQK QLQQQQQSGV ISSTSSLPFA TPIVLNNSGN NNYEGSSGYG SWNIAQSLHS 540 YQTAKPRLSV FQTPIFGME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-142 | AP2 family protein |