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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022721716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 681aa MW: 75358.7 Da PI: 6.8694 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.1 | 6.9e-16 | 323 | 382 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022721716.1 323 SQYRGVTRHRWTGRFEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 382 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.6 | 1.7e-14 | 427 | 476 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022721716.1 427 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 476 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MKTMNDNSNG CNNNWLGFSL SPHMKMEVAI DPQHSHHQFH HHSQASAAAS VSNAVSTSFY 60 LSSHLNGSGI CCEVGESGGF NAPLSVMPLK SDGSLCIMEA LSRSQSEGIV PTSSPKLEDF 120 LGGATMETHQ YGSHERETMA LSSDSMYYHE NTDQEANRQH SLYLLQEPFR QQDQEFAVQT 180 HPYYSGLGCQ GMYQSPLEEE TKDAQLADCD SQISRMQETM TCFKNWVSRH YNNSSLEQQM 240 TASMIDDGAA SGSVRAMGCG DLQSLSLSMS PGSQSSCVTA SRQISPPATE CAAMEIKKRG 300 SGKVGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRFEAH LWDNSCKKEG QTRKGRQVYL 360 GGYDMEEKAA RAYDLAALKY WGPSTHINFP LEKYREELEE MKNMSRQEYV AHLRRKSSGF 420 SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV 480 TNFDITRYDV ERIMASNTLL TGELARRNKE ADSNNEASDN NTPSLTNGET VQPEVNNGNG 540 LDRKMALYPL PQQQPSVDDV VSLEQKYMST GSYRNPSFSM ALQDLIGVDS VSSSQPMVDE 600 STKLGTHYSN PTSLVTSVNN SREGSPDKTG PKMLFAKPPL ASKFITPTNG VSWFPSAASQ 660 LRPAAAVSMA HLPLFATWND T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-130 | AP2 family protein |