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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022714707.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 339aa MW: 37947.9 Da PI: 7.2879 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.7 | 1.8e-15 | 43 | 102 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022714707.1 43 SIYRGVTRHRWTGRFEAHLWDkNCWNEsqsKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 102 57*******************999977777557*************************98 PP | |||||||
2 | AP2 | 41.2 | 4.1e-13 | 134 | 179 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r+++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022714707.1 134 RRHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 179 89999*******99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MAKISQQTQK NSSTTASNIA KPTTKVKRTR KTVPRDSPPQ RSSIYRGVTR HRWTGRFEAH 60 LWDKNCWNES QSKKGRQVYL GAYDDEEAAA HAYDLAALKY WGQDTILNFP LSTYQNELKE 120 MECQSKEEYI GSLRRHHHNG RWEARIGRVF GNKYLYLGTY ATQEEAATAY DMAAIEYRGL 180 NAVTNFDLSR YIKWLRPNHQ SNLNNSESPL QNLNGDTNST QSPKHGIGLG FSIQPKSCST 240 SDTSVTPPPH GCNGGGGSAS SALGLLLQSS KFEEMLERTS AADSPSTPSE PGLPRRSFPD 300 DIQTYFECQD SSSYTESDII FGDLINSFST PMFHCELDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 2e-88 | AP2 family protein |