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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr20768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 469aa MW: 52363.9 Da PI: 8.4022 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.6 | 1.3e-12 | 230 | 286 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g Dr20768.1 230 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 286 78*******************77776664346655.77******************98 PP | |||||||
2 | AP2 | 47.5 | 4.6e-15 | 329 | 380 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Dr20768.1 329 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 380 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence |
MMISCFPPDI LGGLLMNMEV SEESMKQAQP APSATVSSAL PFSFFFPPNH STSSQMTYGV 60 EELYSQLSVM PLRSDGSLCI REALSRSQQE EITVKSSSPK LEDLFSGING YPHQNTEQQT 120 LQREGMFSGL AGQEIFQQPL GEELVAEAGI SSLKNLATQG LGYEDLHYLS LSMNPVPQSS 180 YSIASQYLSP PASAPQFMAL NSTKKKGTGK GVQKQPVHRK TIDSFGQRTS QYRGVTRHRW 240 TGRYEAHLWD NSCKKEGQTR KGRQGGYDME EKAARAYDLA ALKYWGPSTH INFPVSLNNF 300 NFFEKQSASE FYGVFDFMQK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT 360 FSTQEEAAEA YDIAAIKFRG GNAVTNFKIT RYDVEKIMAS STLLTADLAR RSTDTPVKKV 420 LHLTDQEHTN GDGGSDWKMI FELHNKPHPM YISATSWIPM ADQLSWFIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-116 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr20768.1 |