PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr20409.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | Whirly | ||||||||
Protein Properties | Length: 154aa MW: 17135.4 Da PI: 10.0027 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 124.8 | 5e-39 | 68 | 152 | 1 | 85 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgs 85 s+yk+kaal+++++ p+f+ ldsg++k++++G+ l+++a+a+++r+ydW++kq+f+ls+te+++l++l++k+sceffhdp+++ s Dr20409.1 68 SIYKGKAALTIEPRPPEFSPLDSGAFKVSKEGFALMQFAPAVGTRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPFKGRS 152 7********************************************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MALPISHSLP SLTHGFVPKT LXLKRTPSFI VSRRSDYYEP QKVTSRPPPP EDSLSAASQP 60 SRVYVGYSIY KGKAALTIEP RPPEFSPLDS GAFKVSKEGF ALMQFAPAVG TRQYDWSRKQ 120 VFSLSVTEIG TLMSLGAKDS CEFFHDPFKG RSLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-55 | Whirly family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr20409.1 |