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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr18964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 514aa MW: 57001.7 Da PI: 6.8619 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.6e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Dr18964.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 205 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.5e-14 | 248 | 298 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g Dr18964.1 248 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 298 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 514 aa Download sequence |
MWDLNDSPDQ PPASAMVTAA PGSDEDESVS KGKAVESAAS TADDNSSSSA IVIADDDDCA 60 GALAGAGKIF GFSVGESYSG ESEPPVVTRQ FFPVEKMSSE ADGVGASSGC SSLPRAHWVG 120 VQFRQSSEPG GVAGVKPMEV SQPIKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFSLDDYEED LKQMSNLTKE EFVHVLRRQS 240 TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEIEAARAYD KAAIKCNGKD 300 AVTNFDPSIY EPELNSSAXQ LDHNLDLSLG SSGSKRSGLE VMDEDNNGAM MDQRVPFAME 360 PDWRSNNRTT RPKFDDKLKL PEYEPQISSK GSEIYRYQQQ PPQVFQIIQQ QFHNPGSHQY 420 QNSEGMKSIA GNLSLALSED HHHHHHHHHQ HYQQQQQHRQ TWPPPGIAMT QFSAAASSGF 480 PPQSTNTATT TTTTTTMKSP QNWLQKNLFH SRPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-115 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr18964.1 |