PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr18675.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 389aa MW: 41475.5 Da PI: 5.1454

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr18675.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	72.5	5.9e-23	292	353	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +elkrerrkq+NRe+ArrsR+RK+ae+eeL+++v ++++eN+aL++el++l++++ kl se+ Dr18675.1 292 RELKRERRKQSNRESARRSRLRKQAECEELAQRVITIKEENDALRQELDRLREMCGKLSSEN 353 79*********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MYSFVIDLDA ELEDAIXIVS GLSAHLSLLM GNEDVDXPTE NPKSSSAQDQ PPAGSPVTVY 60 PDWATFQMIP PYGTXPFVAM YPPGAIYPHP SVATGSHPYG PYAMPFPNGT NEPSVPVTSG 120 ADADAKSNEG KGRSPLKXSK GSLGSLNMLT GKQNAVPKAS GASGNGPQSQ SGESGSEGST 180 EGSYATSKNG SQHNEDEHGS GDGEAQNGFR QATSAPSVFN QAMPFIAIPP SAITGPTTTL 240 NIGMDYMGGP VTPVPTIRGK ATPAXPPANM HPXTNAGSRD VSQPDLWLQD XRELKRERRK 300 QSNRESARRS RLRKQAECEE LAQRVITIKE ENDALRQELD RLREMCGKLS SENASLTEQV 360 QELXAKKSNG NEPSKGREAX NSETANRVN

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MYSFVIDLDA ELEDAIXIVS GLSAHLSLLM GNEDVDXPTE NPKSSSAQDQ PPAGSPVTVY  60
PDWATFQMIP PYGTXPFVAM YPPGAIYPHP SVATGSHPYG PYAMPFPNGT NEPSVPVTSG  120
ADADAKSNEG KGRSPLKXSK GSLGSLNMLT GKQNAVPKAS GASGNGPQSQ SGESGSEGST  180
EGSYATSKNG SQHNEDEHGS GDGEAQNGFR QATSAPSVFN QAMPFIAIPP SAITGPTTTL  240
NIGMDYMGGP VTPVPTIRGK ATPAXPPANM HPXTNAGSRD VSQPDLWLQD XRELKRERRK  300
QSNRESARRS RLRKQAECEE LAQRVITIKE ENDALRQELD RLREMCGKLS SENASLTEQV  360
QELXAKKSNG NEPSKGREAX NSETANRVN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	308	314	RRSRLRK
2	308	315	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	3e-71	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr18675.1