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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr18632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 560aa MW: 62321.8 Da PI: 8.1186 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.5 | 5.8e-12 | 265 | 321 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g Dr18632.1 265 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 321 78*******************433.44555535555.779999**************98 PP | |||||||
2 | AP2 | 46.3 | 1.1e-14 | 366 | 415 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Dr18632.1 366 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 415 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MDMSSWLGFS LSPLRAASSK EHTSCYGEEE EAAAAHAHAH AAAQVPFGAM PLRSDGSVCL 60 LEPPFRTPCH EWRXGATSSG NQVENKGPKL EDFLGHGYTE NSNEIYYHNS NSYRINVNMP 120 PSFSPAETEA REDTQTPYHV IHSNFHHRPN ILLSNTNPNT HPNPLYNLGF DGGATSLSGF 180 KCWLRQHHYT PEKTAGESPE CNVQSLSLSV NHGALPGSND QAIITSSSSS SSSLLVDGRK 240 RSMAKSTSRE PAARKSIETF GQRTSQYRGV TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG 300 GYDKEEKAAR AYDLAALKYW GPTTNINFPL STYEKELEEM KHMTRQEFVA NLRRKSSGFS 360 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLSAVT 420 NFDISKYDVK RICSSTHLIG SDLAKRSPKD AELQPTEPPS RASGITNSNT DINDFSDMQM 480 IYHNKVEPQL SQLQPDITPS IVNTTKHESP RNSDYGDYSP GLYYGNGGMN WMVPVPASAR 540 PPPAGFPVVH QLPMFAPWTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-125 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr18632.1 |