PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr18364.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 762aa MW: 86696.6 Da PI: 7.0318

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr18364.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.9	8.8e-08	236	256	5	25
CHHHCHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk 25 k rr+++NReAAr+sR+RKk Dr18364.1 236 KTLRRLAQNREAARKSRLRKK 256 788*****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 762 aa Download sequence
MRLRSLTHRV SDNPLSPLRR GNYHFCSPAQ KTSRFALAVR IRVGEASVSG FYWGIRRGGV 60 RVEDVKEAAC GMPSFVNSLP AAHAIDPEEN NMHPSRASDF GVLQQTIGFR VEDAAILNQG 120 TVIDPKSDSQ AGPSDTLQFG AYSKPLAPTD IASLVSTVRP LTLPQQRGQQ PNLASVSSGH 180 FDNWGDSTMA DTSPRTDTST DVDHDDKNQR FDQGQPVAVV PSDSSDRSKE KTGDQKTLRR 240 LAQNREAARK SRLRKKYVDC IFSLDGLWFC TPDTSVFHHL WIITGMAYVQ QLESSRLKLT 300 QLEQELQRAR QQGIFISSSG DQAHSMSGNG AMTFDIEYAR WLDEHNRQIS ELRSAVNSHA 360 SDNDLRSIVD GIMAHYDDIF KLKSAAAKAD VFHLLSGMWK TPAERCFLWL GGFRSSELLK 420 LLTRQLEPLT EQQLAGICNL QQSSQQAEDA LSQGMEALQQ SLAETLAGSL GPKWDLLSTK 480 ATPFHLQSNN FLNIPIQNLR IQLDEPSLKP KSLDAFLELQ QTNKILSGEV LDLKQQLEQL 540 KIEYEREKNE KQMLKEEWEQ EMKNKIQVFE KFPPQLSPLQ KEIMRIVYQE KHQQLIQMVQ 600 LLEKMATSPL QIGGLSFYML KFKGHHHSGI QTCICQEGFS IIQATISLVE WEESLTEFTI 660 QQLFELGLLK KLIITKEEQM KILPQFPERL KKIISSMMNY YPKHFVVLEI FSIPPSYRGY 720 PVYTQHYVRI DMVRHGSPTT YQWDYHSFLS NHIELPTEER LR

Sequence ? help Back to Top

Protein Sequence Length: 762 aa Download sequence

MRLRSLTHRV SDNPLSPLRR GNYHFCSPAQ KTSRFALAVR IRVGEASVSG FYWGIRRGGV  60
RVEDVKEAAC GMPSFVNSLP AAHAIDPEEN NMHPSRASDF GVLQQTIGFR VEDAAILNQG  120
TVIDPKSDSQ AGPSDTLQFG AYSKPLAPTD IASLVSTVRP LTLPQQRGQQ PNLASVSSGH  180
FDNWGDSTMA DTSPRTDTST DVDHDDKNQR FDQGQPVAVV PSDSSDRSKE KTGDQKTLRR  240
LAQNREAARK SRLRKKYVDC IFSLDGLWFC TPDTSVFHHL WIITGMAYVQ QLESSRLKLT  300
QLEQELQRAR QQGIFISSSG DQAHSMSGNG AMTFDIEYAR WLDEHNRQIS ELRSAVNSHA  360
SDNDLRSIVD GIMAHYDDIF KLKSAAAKAD VFHLLSGMWK TPAERCFLWL GGFRSSELLK  420
LLTRQLEPLT EQQLAGICNL QQSSQQAEDA LSQGMEALQQ SLAETLAGSL GPKWDLLSTK  480
ATPFHLQSNN FLNIPIQNLR IQLDEPSLKP KSLDAFLELQ QTNKILSGEV LDLKQQLEQL  540
KIEYEREKNE KQMLKEEWEQ EMKNKIQVFE KFPPQLSPLQ KEIMRIVYQE KHQQLIQMVQ  600
LLEKMATSPL QIGGLSFYML KFKGHHHSGI QTCICQEGFS IIQATISLVE WEESLTEFTI  660
QQLFELGLLK KLIITKEEQM KILPQFPERL KKIISSMMNY YPKHFVVLEI FSIPPSYRGY  720
PVYTQHYVRI DMVRHGSPTT YQWDYHSFLS NHIELPTEER LR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-111	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr18364.1