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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr18110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 208aa MW: 24001.9 Da PI: 7.554 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.3 | 6.2e-26 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rien rqvtf+kRr+g+lKKA ELSvLCdae+ +iifs++gklye + Dr18110.1 10 RIENPVHRQVTFCKRRAGLLKKARELSVLCDAEIGIIIFSTHGKLYELA 58 8*********************************************965 PP | |||||||
2 | K-box | 57.8 | 4.7e-20 | 77 | 173 | 4 | 99 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGe.dLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ + +e++++++ qe++k+k+ei+ Lq+ ++ + Ge ++ ++l eLq+Le+ Le +++ R+ K+++++++i+ l++ke l+ +n+ L++k+ Dr18110.1 77 TQAEGAETNQTQETVQEISKMKQEIDLLQKGLKYMFGErTMGHMTLDELQSLEKYLEIWMNHTRAAKMQIMFMEIQALKNKEGILKAANELLQEKIL 173 4556689999***************************9459*****************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MARGKVQMRR IENPVHRQVT FCKRRAGLLK KARELSVLCD AEIGIIIFST HGKLYELATK 60 GNMQSLIERY KNSCAETQAE GAETNQTQET VQEISKMKQE IDLLQKGLKY MFGERTMGHM 120 TLDELQSLEK YLEIWMNHTR AAKMQIMFME IQALKNKEGI LKAANELLQE KILEQNGVYD 180 VSPMIADIQY PLTIHSDSLT IQNELFQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 7e-67 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr18110.1 |