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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr17547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 701aa MW: 75793.8 Da PI: 6.1301 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.2 | 1.3e-10 | 296 | 352 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g Dr17547.1 296 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEDKAARAYDLAALKYWG 352 57*******************4444.2455535555.7799999*************98 PP | |||||||
2 | AP2 | 46.7 | 8e-15 | 395 | 446 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Dr17547.1 395 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 446 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 701 aa Download sequence |
MGSMNNWLAF SLSPQDLQPS QTPQTHITAA EATTDISSDC FGLSGTHDSS SGIPSLPHGS 60 FSVWDSYNRT HHQPQDWGMK GMEFKGSSSE LSMLVVGSSS NQTNTMEDDE PKLEDFLGGN 120 SFSDNDQKLH PGAYDHSTNE HHYLFSNCSL QLPATATVAA STPNGGGLIN HSTGSGGSSI 180 GLSMIKTWLR NQPAPVQQPE SLNNDSVDHA VASMVGNSQG LSLSMSSGTV TASGSQSSSS 240 LPLMVVGGGG CGGEAGSSSL DEKHKGSASG IDAQNGAIAI EAVQRKSIDT FGQRTSIYRG 300 VTRHRWTGRY EAHLWDNSCR REGQTRKGRQ GGYDKEDKAA RAYDLAALKY WGTTTTTNFP 360 ISNYEKELEE MKHMTRQEYV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK 420 DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV NSILESSTLP IGGAAKRLKD 480 ASENAEASVD GRRMDDEAIT SQLTDGMNSF GSHGWPTIAF QQPQPLAYHY PYGQYRGWCK 540 PEQDSVGIAH NLQDLQQLHL SNNTHNFFQP SAINNLMSLD SSSSMEHSTG SNSVIYNTSA 600 NYQGGFIGGT SGFALPLGGT VVVDQSRNNQ SSSIEYESML PNAYYHLSQP NSAGQVVKDN 660 GYEQSSSCNT WIQASVQSME PSSSNNNNTA GPPIFTVWND A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20840.1 | 1e-123 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr17547.1 |