PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr17283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | GATA | ||||||||
Protein Properties | Length: 254aa MW: 27489.8 Da PI: 8.9648 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.7 | 1.2e-16 | 175 | 212 | 1 | 36 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 C++Cg ++ Tp++Rrgpdg++tLCnaCGl ++ kg++ Dr17283.1 175 CHHCGISSksTPMMRRGPDGPRTLCNACGLIWANKGTM 212 *****99999*************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MSENPGEAGE LRPGSFDGGG GGGGGSAEEG EGMEGVMLPQ VGSNQLTLSF QGEVYVFDSV 60 SPDKVQAVLL LLGGKEITGG LSPPGSSSHQ NNKRSNFPHR VASLMRFREK RKERNFDKKI 120 RYTVRKEVAL RMHRNKGQFT SSKTKHEDAA VSITNMDTPQ HWADVEGRPQ SAPICHHCGI 180 SSKSTPMMRR GPDGPRTLCN ACGLIWANKG TMRDLSKNPM TPIHNAPSEQ KELNNTTIES 240 GTEHATNGHV SIIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 2e-80 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr17283.1 |