PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16060.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 265aa MW: 30340.6 Da PI: 7.2162

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.9	3e-30	53	106	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPkt+l++m+ k ++++hvkSHLQ+YR+ Dr16060.1 53 PRLRWTPELHLSFVRAVERLGGPERATPKTVLQAMNTKEISISHVKSHLQMYRS 106 8****************************************************7 PP
2	Myb_DNA-binding	47.6	3.8e-15	54	105	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg+ t+kt+ + m+ k + ++ks++q+y+ Dr16060.1 54 RLRWTPELHLSFVRAVERLGGPeraTPKTVLQAMNtKEISISHVKSHLQMYR 105 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MASNFSENSL MTLYDDDEEE EEGSIKNGGS SSNSTSENIE GRPVRAYSRS KTPRLRWTPE 60 LHLSFVRAVE RLGGPERATP KTVLQAMNTK EISISHVKSH LQMYRSKKIE DKALGAIGGQ 120 EEHIQNFNQV YMPQAMNQNP ITSXRHPWNN YGQWRMNWYF NGAMGTTMDA RSMMLNQNYN 180 MNNPIEAQHR DHRQFQLMQN ECSERQEATQ KDPMWKDDET EAGIDLNLSL RVAVRPEKKQ 240 RKCEAEGVNS SLSLSLFSPS KSSKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	1e-34	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr16060.1