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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr15858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 243aa MW: 27710.6 Da PI: 9.7884 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.6 | 1.7e-14 | 21 | 62 | 1 | 46 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaa 46 +gy GVr ++ +gr++AeIr + + kr++lg+f+t+eeAa a+ Dr15858.1 21 TGYLGVRKRR-SGRYAAEIRNpF-----TkKRHWLGTFDTPEEAAVAY 62 699****888.8*********66.....34***************998 PP | |||||||
2 | AP2 | 49 | 1.6e-15 | 112 | 155 | 1 | 48 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 +gy GVr+++ gr++AeIr ps+ +kr++lg+f+t+eeAa a++ Dr15858.1 112 TGYLGVRRRP-LGRYAAEIRNPST---KKRHWLGTFDTPEEAAVAYDM 155 699*******.8*********965...5******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MLDLKCIILP CHQRRRCRTS TGYLGVRKRR SGRYAAEIRN PFTKKRHWLG TFDTPEEAAV 60 AYSMSSITFR GIEKAQTNFC HKFLTMPSPS PPAPPPSPLA RSNTRRRGRT STGYLGVRRR 120 PLGRYAAEIR NPSTKKRHWL GTFDTPEEAA VAYDMSSITF RGIEKAQTNF CHKFLTMPSP 180 SPPSPPPSLL PSEKEKEYCF ENNLEINDDH DHLVDRDDDE WINITIILQS FCQSNALPSS 240 LIL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 30 | RRRCRTSTGYLGVRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr15858.1 |