PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr15329.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 166aa MW: 18639.9 Da PI: 5.4181 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 76.4 | 5.2e-24 | 7 | 79 | 28 | 100 |
DUF260 28 kkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +fa++hk+FGasnv+kll +lp ++r da+ ++ yeA+ar++dP+yG+v++i++lqqq+ l+++la+lk++ Dr15329.1 7 THFAAIHKVFGASNVSKLLLHLPVSDRFDAAVTISYEAQARLQDPIYGCVSHIFALQQQVVALQTQLASLKAQ 79 68******************************************************************99987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 166 aa Download sequence |
MRGLGATHFA AIHKVFGASN VSKLLLHLPV SDRFDAAVTI SYEAQARLQD PIYGCVSHIF 60 ALQQQVVALQ TQLASLKAQA SQSFVNLQEH KLFCNKMPSY VIDEQDGSQH GLFPAQEMNE 120 YENSEQKQAS FSFDENFSCA LEPHDLQDQD MEDLRSIAFA YLHHHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58190.1 | 2e-32 | LBD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr15329.1 |