PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15158.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TCP

Protein Properties

Length: 362aa MW: 40568.6 Da PI: 8.628

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15158.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	134.2	1.2e-41	96	256	3	134
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceaesssssasn 84 +kdrhski T++g+RdRR+Rls+e+a+rfFdLqd+L fdk+skt++WLl++ak aike ++ + ssas+ e++s s++++ Dr15158.1 96 LRKDRHSKIFTAQGPRDRRMRLSLEVARRFFDLQDMLAFDKPSKTVQWLLNKAKSAIKEVASIskpncrqfsgdgsislksTESSASDIEDVSTISEQKA 195 69**********************************************************97777777777777766543333333333444333332 PP TCP 85 sssg............kaaksaakskksqksaasalnlakesr..............akarararertrekmrikn 134 + ++ + ++++++ ++ r akarararert+ek+++++ Dr15158.1 196 KLITsmsntqekdrkpA---------------KAKREVVHSMRrratvdpmlvrecrAKARARARERTKEKKMMRS 256 22223333333333221...............2223333322224444444444444*************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MSPFPEPPPP PPPPHEYPYE KPFPCFLGST SSSSPWFPLS PLPLHHEGLH DLLFSPPNTT 60 PTPTPTPSPT PTHDLQLNIE EAINGGVSSK RRSRSLRKDR HSKIFTAQGP RDRRMRLSLE 120 VARRFFDLQD MLAFDKPSKT VQWLLNKAKS AIKEVASISK PNCRQFSGDG SISLKSTESS 180 ASDIEDVSTI SEQKAKLITS MSNTQEKDRK PAKAKREVVH SMRRRATVDP MLVRECRAKA 240 RARARERTKE KKMMRSVSFN GATNEIAVSS SAAIETLEES VSHDLNSSSL EFVADVDEPC 300 SHLHTATERV FGFLMTSNES GQASDYDINL FQDHWGMNFT GNSDDQFHAK QLIYNNSNNN 360 FL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MSPFPEPPPP PPPPHEYPYE KPFPCFLGST SSSSPWFPLS PLPLHHEGLH DLLFSPPNTT  60
PTPTPTPSPT PTHDLQLNIE EAINGGVSSK RRSRSLRKDR HSKIFTAQGP RDRRMRLSLE  120
VARRFFDLQD MLAFDKPSKT VQWLLNKAKS AIKEVASISK PNCRQFSGDG SISLKSTESS  180
ASDIEDVSTI SEQKAKLITS MSNTQEKDRK PAKAKREVVH SMRRRATVDP MLVRECRAKA  240
RARARERTKE KKMMRSVSFN GATNEIAVSS SAAIETLEES VSHDLNSSSL EFVADVDEPC  300
SHLHTATERV FGFLMTSNES GQASDYDINL FQDHWGMNFT GNSDDQFHAK QLIYNNSNNN  360
FL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	5e-21	TCP family protein

Link Out ? help Back to Top
Ensembl	Dr15158.1