PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14909.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 291aa    MW: 31509 Da    PI: 7.2851
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14909.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.41.5e-16210246135
       GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C++Cg +   Tp++Rrgpdg++tLCnaCGl+++ kg+
  Dr14909.1 210 CHHCGISAkaTPMMRRGPDGPRTLCNACGLMWANKGT 246
                *****88889************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSENPIATGE VKLGPAKAMD GGAGAGNPQG MPMYAHERQE SDGEEEHDGV AEVEAMDADH  60
PTDLANLSDQ IGLIVPPVAS NQLTLSFQGE VYVFDSVSPD KVQAVLLLLG GREIAGGLGS  120
MPPSSHPYKR SNFPQRVASL MRFREKRKER NFDKKIRYTV RKEVALRMQR NKGQFTSSKS  180
KPEDATTAVT TWDSTQRWSA DDRPQASAVC HHCGISAKAT PMMRRGPDGP RTLCNACGLM  240
WANKGTLRDL SKNPAPSAQH SFSEAKEVNG NSEAVGEHQP XAINSNGHNA I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-84GATA family protein