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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr13930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 571aa MW: 61757.9 Da PI: 6.7979 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.7 | 8e-10 | 182 | 234 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaark 51 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++ Dr13930.1 182 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEDKAARAYDLAAL 234 57*******************4444.2455535555.7799999*********97 PP | |||||||
2 | AP2 | 47 | 6.1e-15 | 242 | 293 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Dr13930.1 242 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 293 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence |
MVVGSKNNTG LEDEEPKLED FLGGHSFTHH QHQHQQQHHD HGGSCVNDYM FNNSSLGHDQ 60 LPNSNLPSNN AVNDDDPGSG GGGGGDGTST TNHTSSIGLS MIKTWLRNQP SPASTSVPQP 120 VNTASSQSLS LSMSTAGGEC SSSSENKQKT SVNGSAVVDA QSGASTDAVP RKSIDTFGQR 180 TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ TRKGRQGGYD KEDKAARAYD LAALNGFSRG 240 ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF 300 DMSRYDVKSI MESNTLPIGG AAKRLKEVTE HGEASIDGRR IEDVTISQLT GGMTSYASHY 360 HHHGWPSIAF QNTQAMSVYN PNPNPNPNPN PNYVQQRGGW CKQEQPVITH SLHDLHQLQL 420 GNNTHNFFQT PATTMHGFVN GDSPSMEHST GSNSVYYGAG NGSYNGLVLP VNSTVVVDQN 480 PSGFTEDEVK PLGFDGMMAI GDPYNNNNNN NNNASRSSNL YGYEQSSGNG SNNMAWMQAA 540 VQNGNASSFR ANTNNVGVCH GGAVFSVWND T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 7e-91 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr13930.1 |