PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr13627.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 466aa MW: 51247.4 Da PI: 7.2569

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr13627.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.7	1.6e-10	192	233	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Dr13627.1 192 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 233 6889*************************9777666665544 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MVAATEVLCE LANTKRGGVG VGNNNEFDLV MPSFVSSTSV ALPVSTEGNN TQAAPVSGYG 60 GVEQSVGLRR IDTVDLSISP LLDPKSTSLA INSDSXQFTG FNKTFTLPEI TASARVGSFT 120 LPEKKDQRPN LVSLLSGHLE NWGDSTMADS SPRTDTSTDV DTDEKNQGNE QGQHAAVGAS 180 DSSGRSKDKT DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELHRARQQV 240 HPRFWALTFD VEYARWLEEH SRQIGDLRNA VNSHASDVDL RVTVDGVMAH YDEIFKLKGA 300 AAKADVFYML SGMWKTPAER CFMWLGGFRS SELLKLLVSQ LEPLTEQQLV GICNLQQSSQ 360 QAEDALSQGM DALQQSLAET LASGSLGPSG SSGNVANYMG QMAMAMGKLG TLENFLRQAD 420 NLRQQTLQQM HRILTVRQSA RALLAISDYF SRLRALSSLW LARPRE

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MVAATEVLCE LANTKRGGVG VGNNNEFDLV MPSFVSSTSV ALPVSTEGNN TQAAPVSGYG  60
GVEQSVGLRR IDTVDLSISP LLDPKSTSLA INSDSXQFTG FNKTFTLPEI TASARVGSFT  120
LPEKKDQRPN LVSLLSGHLE NWGDSTMADS SPRTDTSTDV DTDEKNQGNE QGQHAAVGAS  180
DSSGRSKDKT DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELHRARQQV  240
HPRFWALTFD VEYARWLEEH SRQIGDLRNA VNSHASDVDL RVTVDGVMAH YDEIFKLKGA  300
AAKADVFYML SGMWKTPAER CFMWLGGFRS SELLKLLVSQ LEPLTEQQLV GICNLQQSSQ  360
QAEDALSQGM DALQQSLAET LASGSLGPSG SSGNVANYMG QMAMAMGKLG TLENFLRQAD  420
NLRQQTLQQM HRILTVRQSA RALLAISDYF SRLRALSSLW LARPRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-148	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr13627.1