PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr13265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | LBD | ||||||||
Protein Properties | Length: 250aa MW: 26615.9 Da PI: 7.798 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 139.1 | 1.5e-43 | 38 | 137 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC++dCv+apyfp ++p+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ e++ +k+e Dr13265.1 38 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFIHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVGVISVLQHQLRQLQIEISCAKSE 137 7*********************************************************************************************999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAASSSSPMG STISIASSLA TTTTTTTSSS SSSSSSSPCA ACKFLRRKCQ PDCVFAPYFP 60 PDNPQKFIHV HRVFGASNVT KLLNELHPYQ REDAVNSLAY EADMRLRDPV YGCVGVISVL 120 QHQLRQLQIE ISCAKSELSK YQSTFGPPSF SSSNPPTTNL ININAQPTAM GSGIGHFFPT 180 SHAREPPQPH LMMMRNSYDT YDDSLVAAAM NASAASFVPF AGGGQFARPN AAAAADDRPG 240 IGPSEKPLCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 9e-60 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr13265.1 |