PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr13211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | GATA | ||||||||
Protein Properties | Length: 237aa MW: 26143.5 Da PI: 10.4904 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.8 | 1.2e-17 | 128 | 161 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C+t+ TplWR+gp g+k+LCnaCG++yr+++ Dr13211.1 128 CADCRTSMTPLWRKGPYGPKSLCNACGIRYRRRR 161 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MVSLFSPTVT ITSCYFLEIP IPFCRHWLRT CASRAGKRHK SPSIRLLFVA PXLSPSPLEN 60 PNPNPMLSTA MRTVSSSPWR SRGHLDSVIS GYDRIEKTYV RRRKMAENQP GSXVXMASSP 120 PSEELKTCAD CRTSMTPLWR KGPYGPKSLC NACGIRYRRR RPMANEGGGS KAKAMKSGKS 180 GGEEEEKKER MVLLLMQHRS KNATPEEIVG SGSGYGRQEA EAALLLMALS SGLVIPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 162 | YRRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 8e-17 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr13211.1 |