PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr12805.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 318aa    MW: 36116.5 Da    PI: 9.0914
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr12805.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding521.7e-162266147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r+rWT+eE+e+++da  ++G + Wk++   +g ++t  q++s+ qky
        Dr12805.1 22 RDRWTEEEHERFLDALILFGRD-WKKVEDFVG-TKTVIQIRSHAQKY 66
                     89******************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MSHGGEVATK KLRKPYTITK ARDRWTEEEH ERFLDALILF GRDWKKVEDF VGTKTVIQIR  60
SHAQKYFLKV QKNGILALVP PPRPKRKATH PYLQKAPGHD SEVMDESFAY SHSSNYFIPA  120
YNTWADGSLA ANYPFNKALP SLDYVTPPPT AEGDKELEMM GGVCNENLSW TGNANISCAT  180
YEEPNQDDSQ KMYPVIPDLA EVYRFIAGLV DPEMKWPLGV YLHKLKQMDP ITVKSILVLV  240
RNLRNNLISP EFELHAKLLA LNMLSRLGYR QIRKRNTISA YDVNSKTIRT ITGTPLTIPA  300
SQVLNCMESN YVGLLPPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.19e-66MYB_related family protein