![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr12803.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 426aa MW: 47078.2 Da PI: 6.5163 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.1e-17 | 133 | 182 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Dr12803.1 133 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 182 78*******************......55************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 426 aa Download sequence |
MVLDLNECSA SLETRVAAEG SGTSESSVLN GPGDEDSCSN PAPMALSFGI LRSAVEGEEE 60 GEGENGVPVE EAEHVTRMFF PPALVAGDSA TVKPPWTDPR FLPPSIGGMA PQQQRPPQVQ 120 VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF 180 RGVDADINFN LSDYDEDLKQ MGNLTKEEFV HSLRRQSTGF SRGSSKYRGV TLHKCGRWEA 240 RMGQLLGKKA YDKAALRCNG REAVTNFEPN TYEGELLPEV DAGDADLDLN LRLSQPSVHN 300 LEKDLNIMGL QLQGASFNDS DHRKARFADP SSHLSIQPNR LSLTNEESRI WSAPSGFLPM 360 YEERTREKRP LETTSPAATL NWWNWQMSRH SPAAAASSGF SNTSIPANHS SELPLASAAH 420 HYYFNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28550.2 | 4e-92 | AP2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr12803.1 |