PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr12211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 160aa MW: 18369.8 Da PI: 4.9708 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124 | 7.6e-39 | 22 | 121 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Ca+C+ l r+C++dCvlapyfpa+qp+kfa vhk+FGasnv+k+l ++ee+reda++s+vyeA+ r++dPvyG++g+i lq+ ++ l+ +l++++++ Dr12211.1 22 PCAGCRKLHRRCNRDCVLAPYFPASQPEKFARVHKVFGASNVIKMLLGIEEERREDAVESMVYEAHERLKDPVYGCTGTIVYLQNCVKDLQGQLKATQDQ 121 7*********************************************************************************************999876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 160 aa Download sequence |
MDDQQGPQYY VGQEGVQMNN MPCAGCRKLH RRCNRDCVLA PYFPASQPEK FARVHKVFGA 60 SNVIKMLLGI EEERREDAVE SMVYEAHERL KDPVYGCTGT IVYLQNCVKD LQGQLKATQD 120 QRDQLINIIM NENTTTFDDN SNFICNNNSF CFSLDQFQLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28500.1 | 2e-40 | LBD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr12211.1 |