PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11686.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

LBD

Protein Properties

Length: 264aa MW: 29138.4 Da PI: 5.3813

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11686.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	28.6	4.1e-09	191	240	51	100
DUF260 51 eeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 e+ ++a+++++ A+++++dP++G+++ i+ lq+++++l++e ++l+e+ Dr11686.1 191 AEQCSMAVNAIIHDARIQTDDPIQGCYRRISILQEHIRSLQEENSQLREK 240 467899*************************************9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MEQKPYELAR RILSRMGYGP HNIASPHRSI PPFGTIEPSH PGNESPLILA INHLPTDHSL 60 SEMTSDQLDS LIFMDENGSP FIRLSNHLPT VIFMESIGKL LRVALKNDNS FAAYSERKSS 120 SVYYTREAAC SEHRRSNDGV GAARGGKGEG AQAANVARGE AERDEPAGDK NAKDRAEEMT 180 VKEMDAVDDV AEQCSMAVNA IIHDARIQTD DPIQGCYRRI SILQEHIRSL QEENSQLREK 240 MWILQVQAAS GSPSPSQNTI GENN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30340.1	4e-07	LBD family protein

Link Out ? help Back to Top
Ensembl	Dr11686.1