PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr10730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | Trihelix | ||||||||
Protein Properties | Length: 143aa MW: 15551.7 Da PI: 10.7467 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48.7 | 2e-15 | 1 | 49 | 38 | 87 |
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 m + gf+rs+k+Ckek en+nk++kk+ke++kkr +e+ +tc yf+ql+a Dr10730.1 1 MIKLGFNRSSKKCKEKRENINKYFKKVKESNKKR-PEDAKTCLYFHQLDA 49 5678*****************************8.99999********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MIKLGFNRSS KKCKEKRENI NKYFKKVKES NKKRPEDAKT CLYFHQLDAL YQRKLAAGAV 60 GGGGVGGGSS NVVSSQALQT KSTSSNQVRH DTTMQSPQQV TPAMVVPETE GKSDGGAQIP 120 TSNGRTSMTF FKETSSGSVM KKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 2e-26 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr10730.1 |