PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10135.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 346aa    MW: 37311 Da    PI: 6.4255
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10135.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA596.1e-19258292135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                Cs+Cg+ kTp+WR gp g ktLCnaCG++y++ +l
  Dr10135.1 258 CSHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRL 292
                *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MLHQTLTSFS FHHSSSSSSS SLQALVSPVK MEVVALKVSS REEMGEVVGE EVGVGLEKGS  60
SLGDEFSIDD LLDFGAEEEA DEAGVREDEE AEVFEPENSN SSSSSSLSLE LPPLSEIALP  120
AADVAELEWV SRIMDDSYSE FPPCSGVIPG VPVPKIEPKV EAVVPVKAKR SKRHRTAGWV  180
RASSGQNPDP TSSSSTSSPV SSCSSSSSSP PCLIYDFKPP SLLLLDDEAP QSPKPKKRGR  240
KPKSIVAATA GATGERRCSH CGVQKTPQWR AGPLGAKTLC NACGVRYKSG RLLPEYRPAC  300
SPTFVSHVHS NSHRKVLEMR RKKAEEEQRR HFLLTIPSSP LLPIYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-40GATA family protein