PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr10076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | LBD | ||||||||
Protein Properties | Length: 253aa MW: 26544.3 Da PI: 7.4439 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.3 | 3.4e-40 | 39 | 139 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ ++++eA+ar+rdPvyG+v++i++lqqq+ +l+ael++l++ Dr10076.1 39 PCGACKFLRRKCVNGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPAHKRLDAVVTICFEAQARLRDPVYGCVAHIFDLQQQVVNLQAELSYLQA 138 7***********************9989********************************************************************9998 PP DUF260 100 e 100 + Dr10076.1 139 H 139 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MSGCTNSTSG SSSGGGGGGG XXXXXXXXGG XXGGGGGGPC GACKFLRRKC VNGCIFAPYF 60 DSEQGAAHFA AVHKVFGASN VSKLLLHIPA HKRLDAVVTI CFEAQARLRD PVYGCVAHIF 120 DLQQQVVNLQ AELSYLQAHL ATLELPSPPP PPPPPPLLAP SPFSISDLPF TSSPPTTLDL 180 STLFDPLNQP QLASQPVQQH GSSRDRSSLA DQISSGGGDL QALARELLHR HHHHHHHQHA 240 ASSQSEPASS LPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 1e-63 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr10076.1 |