PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10000.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 314aa    MW: 36196.2 Da    PI: 4.7471
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.11.1e-145599147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg++++ E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ 
        Dr10000.1 55 RGAFSQVEEDLIIGLHEILGNR-WSQIAAQLP-GRTDNEIKNYWNSC 99
                     89********************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGRHSCCAKQ KLRKGLWSPE EDEKLFNHIT RYGLQRCGKS CRLRWINYLR PDLKRGAFSQ  60
VEEDLIIGLH EILGNRWSQI AAQLPGRTDN EIKNYWNSCL KKKLKQKGID PSTHKPLIEI  120
EPLEPQEQKP DVKDSRTNSF KPVFNPFPMC EFEAVIDTLE TNINLYNQLQ QNFRPFDPNV  180
FAANSEFDLI QPHDSGLFDY NTVFDVSESY GTGESSSNSS NWNCNLGTQL NNVICNETVN  240
WSSETNKLEA LFQMEVNATV QAQQGKKELY PWPQEQQQEQ NSEDYNSFPS QSRSQEISDG  300
CFDLSQGQFD ADFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100106LKKKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.13e-67MYB family protein