PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09857.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

CAMTA

Protein Properties

Length: 1133aa MW: 128034 Da PI: 6.2427

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09857.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.9	1.2e-50	37	150	5	117
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahsee.nptfqrrcywlLe 103 rwlk+ e+ iL+n+e+++lt+e+++rp+sgsl+L+nr+++r+frkDGy w+kk+dg+t+ E+he+LKv++v+vl+cyYah+e n +qrr+yw+L+ Dr09857.1 37 LIRWLKPAEVFFILKNHESFQLTHEPPKRPPSGSLFLFNRRVLRFFRKDGYVWRKKRDGRTISEAHERLKVENVNVLNCYYAHGEPpNLYLQRRSYWMLD 136 579*******************************************************************************7527789***** PP CG-1 104 eelekivlvhylev 117 ++e+ivlvhy+ev Dr09857.1 137 PAYEHIVLVHYREV 150 **********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1133 aa Download sequence
MLANRAFALS VPWLLLWRSK EIIWSEDNAV WLRQEALIRW LKPAEVFFIL KNHESFQLTH 60 EPPKRPPSGS LFLFNRRVLR FFRKDGYVWR KKRDGRTISE AHERLKVENV NVLNCYYAHG 120 EPPNLYLQRR SYWMLDPAYE HIVLVHYREV TEGIFASRNI ATPSINQELL AFNHVEDVQL 180 LNSHGQPLPA YRDHNKVGDV QEQVGYSGSQ MLDFAGGGEK HQMQSGSSSS AIVSNKNEPS 240 PKDMMNLSSD SAQTDLYDTF FHPSQQETXF GPLNEQLETQ FWDQLDVGVN GHQISHSESG 300 SHLSAARRFL FESDSLIESP TSHLPEFEKV QNYTSEAWNL DQQSRLVPGE GNDTDLLGPV 360 TSGIENNHYS SDYSGMWGDA SQFEIPLTTD SSVTVSQKQL FSIREISPEW AFTSGNTKVI 420 IAGAFLCNAL DFSWSVMFDD IEVRAEIVQE GILRCRTPQH GTGKVTLCVT SSNRESCSEL 480 REFEFCADPT NSNSAVTSLQ PDARKNDEEL RLLMSFTKML LCRPDSAANH VEXFGKVXLT 540 DNMSEQLTVT LPDTVDWILQ ELLKDKLQQW LLSRRQMDGT KCSLSKQEQG IIHVISGLGY 600 EWALSLILEA GVGINFRDAK GWTALHWAAR FGREKMVAVL IAAGASAGAV TDPTSHBPLG 660 KTAASVASAH GHHGLAGYLS EVALTSHLSS LTLEESEIYK GSAEVEAERK MESISQRSNE 720 LHVGGTEDEL SLKDSLAAAR NATQAAAXIQ SAFRAYSFRK KQLKTSKSCD PHDFGLTQEE 780 LNALSSASKF RWSFNVPRDH KYGTAALAIQ KKFRSWHERK AYVNKRNHVM KIQAHVRGYQ 840 TRKKYKELLW AVNVLEKAVL RWLRKGDGLR GIQLEHITDD DEDEDEDIVR LLRKQKINPA 900 LDQAVARVLT LVESPEARKQ YCRVLERYRQ AMEHRTEGTA PSDSCIMEKK DVDNHNNNNK 960 VELEVVHIAI QQLLDERKKN KKELVEDEDE DEDEDKLLSK LLTQVELLEK DHKNGBKEET 1020 SRNSVENDVR IDEVVKEIKG VKRQNMITHC LLSVLIIATA FWQLSEVSIL LAVKEKLSNP 1080 VKAIGDLFKG VLKGQNNKLL TEPPPMPPQL PHVNIPALSL NNNAGHRDGD ISE

Sequence ? help Back to Top

Protein Sequence Length: 1133 aa Download sequence

MLANRAFALS VPWLLLWRSK EIIWSEDNAV WLRQEALIRW LKPAEVFFIL KNHESFQLTH  60
EPPKRPPSGS LFLFNRRVLR FFRKDGYVWR KKRDGRTISE AHERLKVENV NVLNCYYAHG  120
EPPNLYLQRR SYWMLDPAYE HIVLVHYREV TEGIFASRNI ATPSINQELL AFNHVEDVQL  180
LNSHGQPLPA YRDHNKVGDV QEQVGYSGSQ MLDFAGGGEK HQMQSGSSSS AIVSNKNEPS  240
PKDMMNLSSD SAQTDLYDTF FHPSQQETXF GPLNEQLETQ FWDQLDVGVN GHQISHSESG  300
SHLSAARRFL FESDSLIESP TSHLPEFEKV QNYTSEAWNL DQQSRLVPGE GNDTDLLGPV  360
TSGIENNHYS SDYSGMWGDA SQFEIPLTTD SSVTVSQKQL FSIREISPEW AFTSGNTKVI  420
IAGAFLCNAL DFSWSVMFDD IEVRAEIVQE GILRCRTPQH GTGKVTLCVT SSNRESCSEL  480
REFEFCADPT NSNSAVTSLQ PDARKNDEEL RLLMSFTKML LCRPDSAANH VEXFGKVXLT  540
DNMSEQLTVT LPDTVDWILQ ELLKDKLQQW LLSRRQMDGT KCSLSKQEQG IIHVISGLGY  600
EWALSLILEA GVGINFRDAK GWTALHWAAR FGREKMVAVL IAAGASAGAV TDPTSHBPLG  660
KTAASVASAH GHHGLAGYLS EVALTSHLSS LTLEESEIYK GSAEVEAERK MESISQRSNE  720
LHVGGTEDEL SLKDSLAAAR NATQAAAXIQ SAFRAYSFRK KQLKTSKSCD PHDFGLTQEE  780
LNALSSASKF RWSFNVPRDH KYGTAALAIQ KKFRSWHERK AYVNKRNHVM KIQAHVRGYQ  840
TRKKYKELLW AVNVLEKAVL RWLRKGDGLR GIQLEHITDD DEDEDEDIVR LLRKQKINPA  900
LDQAVARVLT LVESPEARKQ YCRVLERYRQ AMEHRTEGTA PSDSCIMEKK DVDNHNNNNK  960
VELEVVHIAI QQLLDERKKN KKELVEDEDE DEDEDKLLSK LLTQVELLEK DHKNGBKEET  1020
SRNSVENDVR IDEVVKEIKG VKRQNMITHC LLSVLIIATA FWQLSEVSIL LAVKEKLSNP  1080
VKAIGDLFKG VLKGQNNKLL TEPPPMPPQL PHVNIPALSL NNNAGHRDGD ISE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-125	CAMTA family protein

Link Out ? help Back to Top
Ensembl	Dr09857.1