PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr09452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | B3 | ||||||||
Protein Properties | Length: 244aa MW: 27776.3 Da PI: 9.5091 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 80.3 | 2e-25 | 26 | 116 | 11 | 98 |
HHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +k++rlv+pk++ae++ + e++ l +ede g+ W+++++y+ +s++yvltkGW+++vk+++L++gD v+F+++ + ++++ +r Dr09452.1 26 GKLNRLVIPKQYAEKYfplaseS--GEKGLLLCFEDEGGKLWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDLVIFERTLA-GDRFFIACRR 116 6889***************9643..457789************************************************5533.3333555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
VFISNVQRNF LSSISVPCKV RARFDGKLNR LVIPKQYAEK YFPLASESGE KGLLLCFEDE 60 GGKLWRFRYS YWTSSQSYVL TKGWSRYVKE KRLDAGDLVI FERTLAGDRF FIACRRRGSP 120 EEPSSSSAHN AWNQQSFYNS YNASSSMPSS YLYMSSMQQD CFVQRGGEQR SRSNNTVGVP 180 KTLRLFGVNL ECIPDETEDQ EQVVHSGMCF MDQNSVHRGR FMPGNASTSQ LLKRGRDMGG 240 GQKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06250.2 | 1e-47 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr09452.1 |