PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09386.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family B3
Protein Properties Length: 771aa    MW: 88218.3 Da    PI: 8.1525
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09386.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.38.8e-1616901797
               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                +p +f++++++k+    +++l+ +sg +W vkl  +++ ++++l +GW +Fvk + L+e +f+vF+++gr  f   v vf
  Dr09386.1 16 KIPVRFMKHISMKS--LEKVVLRGPSGSRWPVKL--SRTVKGTFLCDGWMNFVKTHALREYEFLVFRYNGRALF--DVLVF 90
               69*****8888774..458***************..999999**************************997666..55555 PP
2B344.82.2e-142353111598
                -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ++lp +f +eh   +++ + l+++d++g+ W + +    +  r +l++GW  F++ n+L+egD++vF+l+g  ef  +v++fr
  Dr09386.1 235 TVTLPTPFSREHL--PRRRTNLVFRDPNGQAWVIMF--IPGL-RNWLSGGWPAFARGNNLEEGDICVFELVGPIEF--HVHIFR 311
                589*********5..346679***************..5655.568************************996666..9**998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    
MWGSRAHHRT VPSPCKIPVR FMKHISMKSL EKVVLRGPSG SRWPVKLSRT VKGTFLCDGW  60
MNFVKTHALR EYEFLVFRYN GRALFDVLVF DITACEREDL FNIRRRKRLR KHKLEVLSLP  120
QPEVIKTELK ETQIQDVVYP VTMLKDACPD SVQGESLVNS ETDKHVEIKV EVTEIPIVAA  180
SPKKCLKTQG YLSRRRPVSE EERSKAWEAA NSFTSNFPYT VVCLSALHVY KASPTVTLPT  240
PFSREHLPRR RTNLVFRDPN GQAWVIMFIP GLRNWLSGGW PAFARGNNLE EGDICVFELV  300
GPIEFHVHIF RVVDETSIGG TIGTLAEFVV TPRRIDSMTL IQIQSLCHGW DSLSFSLSYQ  360
IRTMKRTCAI EIGPAAAPLG LYLREGMERS SLQNQAAAMK KSFFDQGYLD EQFYQLEELQ  420
DDASPNFVEE VVALFLRDSS RLIGIIDQAM DKHPQDYLKL ETYMHQLKGS SSSIGALKVK  480
NECTHFREYC AEDNLEGCLR SFQKLKREHA ILKQKLEAYF QVHFWFPVDI VILHIDKADV  540
CNKSLDSTLN FSVIPKFTKS SKMATLTILK DVSGIXKPSR PSMKIKMHAW NSVMNFSGEM  600
IVGPSKILFX DEISTGLDSS TTFQIVKTLQ QIAHFTGSTI HLKIFVLFDD IILLSEGQIV  660
YQGPRERVLD FFHSCGFHCT ERIGIXDLLQ EVLSXKDQEQ CWADMDKPYN YISVSEFAEK  720
FKRFEVGXHL ENQLXVPFDR KTSHKAAIVF TDTTVPLSEL LRTSFAKEWL L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105111RRKRLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-16B3 family protein