PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09377.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 322aa    MW: 35194.7 Da    PI: 4.9481
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09377.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.8e-17223257135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C +C t  Tp+WR gp g+ktLCnaCG++y++ +l
  Dr09377.1 223 CLHCSTDRTPQWRTGPLGPKTLCNACGVRYKSGRL 257
                99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEESECVSGG LSSPEKLVKE HFIVDELLDF XNBDBDDKVL FTVXDENVFD AEPVNSSESS  60
TVATANAGXP NSKLTSDVBA WPNFLCGDLC EPYEELAELE WLSNFVEESF SSEDLEKLHL  120
ISGTKVQTEA QTNGMNTNHG TPEPGIFLPE PSVPGKARSK RSRAAASTAW SSSLLVXSPS  180
TSTSCESELL VPNNNGNATK KQGKKRRETP EKPSLAASDG RKCLHCSTDR TPQWRTGPLG  240
PKTLCNACGV RYKSGRLVPE YRPAASPTFV LSKHSNSHRK VIELRRQKDM RQQQELISGA  300
AAMTAAGGGD EFLIDRRIGL EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-65GATA family protein