PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr09353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24956.4 Da PI: 9.9592 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2.1e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ Dr09353.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 113.5 | 2.1e-37 | 81 | 173 | 8 | 100 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s +ea+++++qqe++kL+++i nLq+++R+l+Ge L+++sl++L+qLe++Lek+++kiRskKnell+++ie++qk+e elq++n++Lr+k++e Dr09353.1 81 SINEANSQYYQQESSKLRQQITNLQNSNRNLMGEALSTMSLRDLKQLENRLEKGISKIRSKKNELLYAEIEYMQKREMELQNDNMYLRNKIAE 173 47899*************************************************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MGRGKTEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFST RGRLYEYANN 60 SVRATIERYK KACSGTPNTG SINEANSQYY QQESSKLRQQ ITNLQNSNRN LMGEALSTMS 120 LRDLKQLENR LEKGISKIRS KKNELLYAEI EYMQKREMEL QNDNMYLRNK IAENERAQQT 180 LNMLPVTTTA AVYDLMPPFD SRNFLQVNLL DPNRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-106 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr09353.1 |