PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09143.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 424aa MW: 46829.6 Da PI: 6.9171

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09143.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.6	7.2e-10	140	182	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k rr+++NReAAr+sR+RKka++++Le +L++ ++L+k Dr09143.1 140 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQK 182 7789************************988888887777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MHPSRTSDFG ALEQNIGLCI EETTILSRDP VIDPKPSSQA VVTDLQFSAY ANTHPSSDIA 60 SLAARIGPLK LPQSGQQPHP ASVSSSHFEN WGESTMADAS PRTDTSTDVD HDDKNPRVQP 120 IAVVPSDSSD RSKDKIGDQK TLRRLAQNRE AARKSRLRKK AYVQQLESSR LKLTQLEQEL 180 QKARQQGIFI SSTGDQSHAV GGNGALTFDM EYARWLDDHN RQISELRNAV NSHASDTDLR 240 AIVDGIMSHY DDIFKLKNAA AKADVFHLLS GMWKTPAERC FMWLGGFRSS ELLKLLASHL 300 EPLTEQQLMG ICNLQESSQQ AEDALSQGME ALQQSLAETL AGSLGPSGSS GNVANYMGQM 360 AMAMGKLGTL ENFLRQADNL RQQTLQQMQR ILTTRQAARA LLAINDYFSR LRALSSLWLA 420 RPRD

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MHPSRTSDFG ALEQNIGLCI EETTILSRDP VIDPKPSSQA VVTDLQFSAY ANTHPSSDIA  60
SLAARIGPLK LPQSGQQPHP ASVSSSHFEN WGESTMADAS PRTDTSTDVD HDDKNPRVQP  120
IAVVPSDSSD RSKDKIGDQK TLRRLAQNRE AARKSRLRKK AYVQQLESSR LKLTQLEQEL  180
QKARQQGIFI SSTGDQSHAV GGNGALTFDM EYARWLDDHN RQISELRNAV NSHASDTDLR  240
AIVDGIMSHY DDIFKLKNAA AKADVFHLLS GMWKTPAERC FMWLGGFRSS ELLKLLASHL  300
EPLTEQQLMG ICNLQESSQQ AEDALSQGME ALQQSLAETL AGSLGPSGSS GNVANYMGQM  360
AMAMGKLGTL ENFLRQADNL RQQTLQQMQR ILTTRQAARA LLAINDYFSR LRALSSLWLA  420
RPRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-143	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr09143.1