PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08801.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 384aa    MW: 43457.8 Da    PI: 5.5043
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08801.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.21.7e-16741135
       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
               C++Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  Dr08801.1  7 CHHCGATSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
               ****************88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MGKQGPCHHC GATSTPLWRN GPPEKPVLCN ACGSRWRTKG TLTNYFPFQA REHKNLEGTK  60
VPEAPKLKIF SSKIKEQRIH RRMQENVTEE IEHETPYCGQ NFQKFFDEDV SNRSSSGSAI  120
SFSEGCAYFA ASDMNDLTAS QQSVVWEPVV PSRKRACIPR PKPSSVEKLR RDLYSIMCEQ  180
QSSNISEITD SDLLYENENL SASAEIGHGG VLIRLPNSKV VEEESEASSF PINDKLYNEN  240
KVYTSDISEC EKLYVLQGRD SPLSRIDLKD VISFEAFSSL FSDEEQQLLI KFLPSADTAK  300
TQTSLKSMFF SPQFLEDLHC FQQLLLEGIF DLSLSGVDAK ECNNLKNLVL NNTEKARWVE  360
QYEQLKDVKH QKTSKHGIDE TTVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-86GATA family protein