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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr08673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 28859.6 Da PI: 9.3235 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.1 | 8.4e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ Dr08673.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 107.4 | 1.7e-35 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++++++qe++kLk++ ++Lqr+qRhllGedL++L++keLqqLe+qLe++l + R++K++++l+q+eel+kke+ l ++nk+L++kle Dr08673.1 81 IGDHETQNWYQEVSKLKAKFDSLQRSQRHLLGEDLGPLNVKELQQLERQLESALAQARQRKTQIMLDQMEELRKKERHLGDINKQLKSKLE 171 67899************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSS 60 GLSKTLERYQ RCCYNPQDLN IGDHETQNWY QEVSKLKAKF DSLQRSQRHL LGEDLGPLNV 120 KELQQLERQL ESALAQARQR KTQIMLDQME ELRKKERHLG DINKQLKSKL EAENSAFRAI 180 QGSWETEGVV PNHGFPVHHS QATAMETEPI LQIGYHHYVP TEVNMARNAN GENNNNNNNN 240 NTNFMHGWVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 3e-99 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr08673.1 |