PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07918.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 438aa MW: 46824.9 Da PI: 10.1715

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07918.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.4	8.5e-15	360	409	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++L k+ e+ + Dr07918.1 360 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEQNQELEKKQAEIVQ 409 79*************************************99988666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MNFKNMGSDG RPVSGSAAGA AMPLARQSSI YSLTFDEFQS TLGGMGKDFG SMNMDEFLKN 60 IWTAEESQAM AAALAGSDGS GLGAGGPGLQ RQGSLTLPRT LSQKTVDEVW RDLIKEGSST 120 AVQGVAGPEI QQKQQQQQQQ QRQQQRQPTL GEMTLEEFLV RAGVVREDMN MNMNMNMNMN 180 MNMNMNMNMN MNHSASRPII SSSISTVNTG GVSSNSVFYG DVPSSNSATG IEISFPQIGR 240 SNGGIVPSSI SNSPGTNLPI TATGTRSYVA PMGNHHGLRG GGMVGIGDPA MGNGLMQGMV 300 GLGVGGVTVA AAVGSPANQI SSDGLGKGNG DLSSVSPVPY TFGAGLRGRK CSAVEKVVER 360 RQRRMIKNRE SAARSRARKQ AYTMELEAEV AKLKEQNQEL EKKQAEIVQM QKNQVLEMIN 420 QQHGPKRRCL RRTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MNFKNMGSDG RPVSGSAAGA AMPLARQSSI YSLTFDEFQS TLGGMGKDFG SMNMDEFLKN  60
IWTAEESQAM AAALAGSDGS GLGAGGPGLQ RQGSLTLPRT LSQKTVDEVW RDLIKEGSST  120
AVQGVAGPEI QQKQQQQQQQ QRQQQRQPTL GEMTLEEFLV RAGVVREDMN MNMNMNMNMN  180
MNMNMNMNMN MNHSASRPII SSSISTVNTG GVSSNSVFYG DVPSSNSATG IEISFPQIGR  240
SNGGIVPSSI SNSPGTNLPI TATGTRSYVA PMGNHHGLRG GGMVGIGDPA MGNGLMQGMV  300
GLGVGGVTVA AAVGSPANQI SSDGLGKGNG DLSSVSPVPY TFGAGLRGRK CSAVEKVVER  360
RQRRMIKNRE SAARSRARKQ AYTMELEAEV AKLKEQNQEL EKKQAEIVQM QKNQVLEMIN  420
QQHGPKRRCL RRTQTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	3e-85	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr07918.1