PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07912.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HSF
Protein Properties Length: 326aa    MW: 36119 Da    PI: 8.9559
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07912.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.5e-36551462102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+ye++ed+e++e+isw e g+sfvv+++ efa+++Lp +Fkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+++ll++i+
     Dr07912.1  55 FLIKTYEMVEDAETDEVISWAEMGKSFVVWKPVEFARDILPAHFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDYFRRGEQNLLSEIR 142
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+ks
     Dr07912.1 143 RRKS 146
                   **97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPNTCTGLLL RDTGGKEKAE ITEDVPAETK GKKLKMRGMG RNGRRGGGMG GPPPFLIKTY  60
EMVEDAETDE VISWAEMGKS FVVWKPVEFA RDILPAHFKH NNFSSFVRQL NTYGFRKIVP  120
DRWEFANDYF RRGEQNLLSE IRRRKSIQAQ SATKGNPLPP SASNSVEAPS ISTASSPPPA  180
ATSQNPQHFL DLSNENKKLK EDNQLLSSEL AQAKLKCEEL LASLSAYADA RELDTRPLVQ  240
EAARQGVRIA SSVREVTQWE VDAEMGGEKE ECLKLFGVLF KVFEGRKKRG RCEEGSSSPG  300
QPMKMRLGAP WMGISPPVQG SNSVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-61HSF family protein