PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07519.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

CAMTA

Protein Properties

Length: 1339aa MW: 149933 Da PI: 6.0451

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07519.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	141.2	3.1e-44	358	442	34	118
CG-1 34 pksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 +gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK ++v+vl+cyYah+een++fqrr+ywlL+e+l +ivlvhylevk Dr07519.1 358 LLCGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAESVDVLHCYYAHGEENENFQRRSYWLLDEDLMHIVLVHYLEVK 442 568*******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1339 aa Download sequence
MFSCVRTLVE VFKKVKKVGE NPQEGVNARL EPCEQLVLNG RVHGCGVCLR VSRVIRIKNE 60 VNQTPNEPFR AILVKGVCGV QCLRAEKRPY EDVFLGFAWM GGFWRVPKNT LAAVAAVAAA 120 AASEPPELLN LLGDIAVAAQ GIYLWVKQIE SYRDDDIIDL RLALRQPRVE AVLDLPWVVV 180 AIYAEIRSYP ISDKSHGYES MALSLYCDYH NGITVNHLST LLVEFPPHDC VKMCTSLIPK 240 QMYGAQKAVD FKPGCSRVVD SSMADSRRHG AVPQLDIEQI LVEAQNRWLR PAEICEILRN 300 YQKFRIAPEP PNKPRKVMSM ALFSVDYGAS VSINNQRSFW LLDLYIRSHR IISPTLLLLC 360 GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKAE SVDVLHCYYA HGEENENFQR 420 RSYWLLDEDL MHIVLVHYLE VKGNRSNFNR SRDAEEPVQS AHITTPTSSS SFTNQNPSPS 480 RAMDAESPIS AQTSEYEDAE SDNCQASSRY HPFPALQQHD DGHVRDAHPL NPYTPVPSLG 540 NHESFQGAAP ESEFYSVAQE DITKVLDESG IGFTFTGPRT QFDLASWEDV FKHSTAGFEN 600 TFFQPMAGTE ADIGGGVANL EASPLMELLM DDLTTSQVDG NNTQGKAIWQ FPESGAGPSG 660 TSRSDDLMNG LYREGNIDLP SLIKQRSLGL SNPEEGLKKY DSFSKWMSKE LGEVVDAQLN 720 SNSDVYWDSV ESGGVLEDPS KQEQLDACLI SPSLSQDQLF SIIDFSPNWS YGDKETEVLI 780 TGKFLRSRDE VENCKWSCMF GEVEVLASVI SFDILRCHAP KHKSGRVPFY VTVSNRLACS 840 EVREFEFRVN RDRAMGASDP YNSSVDGINL QRFERMLCLE SVKPSELFDN SGGMPYSSSV 900 IGWPPVEVSD DLNWANNKEL YSESLRDVLI QEPLKEKLYA WLLCKVAEGG KGPCVLDKEG 960 LGVLHLAAAL GYDWAIEPIT NAGVNINFRD VHGWTALHWA AFCGRERMVV SLVALGAAPG 1020 LLTDPTPEFP SGRTPADLAS VNGHKGISGF LAEASLTSQL STLTLKDSSG VNAGDVSDVK 1080 AVEDVGEKNA LQISYEDMPD GLSMKDSLSA VRNAAQAAAR IHQVYRVHSF QRKKLIECGD 1140 DKRGLSNERA LSFISVKSVK TGQHDMPVHV AAIRIQNKFR GWKGRREFLI TRQRIVKIQA 1200 HVRGHQVRKH YRRIVWSVGI VEKVILRWRR KGSGLRGFRP EGQIVGPSVQ AQEANDDYDF 1260 RQDGRKQTEA RLEKALARVR SMVQYPEARD QYRRLMTIVT ELQDSKVMQD DVNESDATDG 1320 DFMTGLEELC DDDTLIPYA

Sequence ? help Back to Top

Protein Sequence Length: 1339 aa Download sequence

MFSCVRTLVE VFKKVKKVGE NPQEGVNARL EPCEQLVLNG RVHGCGVCLR VSRVIRIKNE  60
VNQTPNEPFR AILVKGVCGV QCLRAEKRPY EDVFLGFAWM GGFWRVPKNT LAAVAAVAAA  120
AASEPPELLN LLGDIAVAAQ GIYLWVKQIE SYRDDDIIDL RLALRQPRVE AVLDLPWVVV  180
AIYAEIRSYP ISDKSHGYES MALSLYCDYH NGITVNHLST LLVEFPPHDC VKMCTSLIPK  240
QMYGAQKAVD FKPGCSRVVD SSMADSRRHG AVPQLDIEQI LVEAQNRWLR PAEICEILRN  300
YQKFRIAPEP PNKPRKVMSM ALFSVDYGAS VSINNQRSFW LLDLYIRSHR IISPTLLLLC  360
GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKAE SVDVLHCYYA HGEENENFQR  420
RSYWLLDEDL MHIVLVHYLE VKGNRSNFNR SRDAEEPVQS AHITTPTSSS SFTNQNPSPS  480
RAMDAESPIS AQTSEYEDAE SDNCQASSRY HPFPALQQHD DGHVRDAHPL NPYTPVPSLG  540
NHESFQGAAP ESEFYSVAQE DITKVLDESG IGFTFTGPRT QFDLASWEDV FKHSTAGFEN  600
TFFQPMAGTE ADIGGGVANL EASPLMELLM DDLTTSQVDG NNTQGKAIWQ FPESGAGPSG  660
TSRSDDLMNG LYREGNIDLP SLIKQRSLGL SNPEEGLKKY DSFSKWMSKE LGEVVDAQLN  720
SNSDVYWDSV ESGGVLEDPS KQEQLDACLI SPSLSQDQLF SIIDFSPNWS YGDKETEVLI  780
TGKFLRSRDE VENCKWSCMF GEVEVLASVI SFDILRCHAP KHKSGRVPFY VTVSNRLACS  840
EVREFEFRVN RDRAMGASDP YNSSVDGINL QRFERMLCLE SVKPSELFDN SGGMPYSSSV  900
IGWPPVEVSD DLNWANNKEL YSESLRDVLI QEPLKEKLYA WLLCKVAEGG KGPCVLDKEG  960
LGVLHLAAAL GYDWAIEPIT NAGVNINFRD VHGWTALHWA AFCGRERMVV SLVALGAAPG  1020
LLTDPTPEFP SGRTPADLAS VNGHKGISGF LAEASLTSQL STLTLKDSSG VNAGDVSDVK  1080
AVEDVGEKNA LQISYEDMPD GLSMKDSLSA VRNAAQAAAR IHQVYRVHSF QRKKLIECGD  1140
DKRGLSNERA LSFISVKSVK TGQHDMPVHV AAIRIQNKFR GWKGRREFLI TRQRIVKIQA  1200
HVRGHQVRKH YRRIVWSVGI VEKVILRWRR KGSGLRGFRP EGQIVGPSVQ AQEANDDYDF  1260
RQDGRKQTEA RLEKALARVR SMVQYPEARD QYRRLMTIVT ELQDSKVMQD DVNESDATDG  1320
DFMTGLEELC DDDTLIPYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	Dr07519.1