PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr06923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | LBD | ||||||||
Protein Properties | Length: 189aa MW: 20279.1 Da PI: 8.1176 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 142.6 | 1.2e-44 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+k+l++l +++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l++el+++++ Dr06923.1 10 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKILNELLPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQSQVQRLQKELDAANA 108 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MASSSSSNSP CAACKFLRRK CMPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKILNELLP 60 HQREDAVNSL AYEAEARMKD PVYGCVGAIS VLQSQVQRLQ KELDAANADL LRYACGEIPA 120 GMPLPSLLQP SPMGRIEAVR RANNGGGGPI YYHGTGLQSP YPPPWTGGHP LGDMENQRKG 180 GGDSSSSSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 1e-68 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr06923.1 |