PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr06625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB_related | ||||||||
Protein Properties | Length: 254aa MW: 28931.9 Da PI: 4.8426 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 38 | 78 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++l +d+++qlG++ W++Ia+ ++ gRt++++k++w+++ Dr06625.1 38 SDSEEKLVIDLHAQLGNR-WSKIASQLP-GRTDNEIKNHWNTH 78 788***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDNRGRQEVN KLHPHQWPLL LESCTKACRP DLKRGLLSDS EEKLVIDLHA QLGNRWSKIA 60 SQLPGRTDNE IKNHWNTHIK KKLRKMGIDP MTHKPISNTI SSSTHDHDQV PQEQAQHERQ 120 ASSSPEANVQ KSKEKCSQCS KSITEDNDTN YNEDRISDEQ LCDQSASCFF STDDVPMIEA 180 HEIIVNPKGS SCSTPSSSYG GMVEENQFQD FDWPETTSFW GVDDFTGLDF NCGDPFNLIQ 240 RAVLDQESWM FEAF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 4e-41 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr06625.1 |