PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06445.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WOX

Protein Properties

Length: 264aa MW: 30126.9 Da PI: 7.549

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06445.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.4e-18	32	92	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+ +t++q+++L +l++ r p+ae++++++++l +++ ++V++WFqN++a+e++ Dr06445.1 32 SRWIPTSDQIRILRDLYYVngLRSPNAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 92 8***************5459***********************************97 PP
2	Wus_type_Homeobox	110.7	8.3e-36	30	94	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW Pt++Qi+iL++ly+ +Glr+Pn+e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ Dr06445.1 30 SSSRWIPTSDQIRILRDLYYvNGLRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 94 789**************99****************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MEHQQQQHHE ERKTTTTTTS TTSGFLCRQS SSRWIPTSDQ IRILRDLYYV NGLRSPNAEQ 60 IQRISARLRQ YGKIEGKNVF YWFQNHKARE RQKKRLTVDI PSNKYSSSSS TTTTNHHHHH 120 HHLPPGVAAH QSMFMERSFK ESCFFGGDGA MVMESSSSSS MGWVGVEVGM THEQENRDME 180 TLKLFPMNKQ EEQDEQDQVH GIHGYNNNNN NNNNNNNNNG GYVLAGKMGG SQPDFYWTGG 240 SQQHTAGTAS LELTLNSYYY EGST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	6e-36	WOX family protein

Link Out ? help Back to Top
Ensembl	Dr06445.1