PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr06433.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB_related | ||||||||
Protein Properties | Length: 345aa MW: 37717.6 Da PI: 8.3065 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.4 | 6.8e-13 | 101 | 145 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Iar + Rt+ q+ s+ qky Dr06433.1 101 PWTEEEHRMFLLGLRKLGKGDWRGIARNFVVSRTPTQVASHAQKY 145 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MTRRCSHCSN NGHNSRTCPA RAGGVKLFGV RLTEGVGPMK KSASMGCLSS ATSAAAMASP 60 NNPGSPSSDP HRDHPSGYAS DDPTHASCSS SCRSERKKGI PWTEEEHRMF LLGLRKLGKG 120 DWRGIARNFV VSRTPTQVAS HAQKYFIRQT NATRRKRRSS LFDMVPEMPM DELPVLEEQF 180 MVQSPPNEPE TQSKSPSLHI SMDQEPEPKE TSSQDTPAEP QENAPQYNTM SIPIPMVPAF 240 YPAFMPVPLP FWPASNMTNT TKEEEMGEAH EVLRPTPVLP KDANHMDFGM SKLCIGEGGP 300 SRIEPSALSL KLRGPSSSRQ SAFHINPSIA GPDLSQSKTN AIHAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 1e-80 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr06433.1 |