PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05855.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Protein Properties

Length: 317aa MW: 35566.1 Da PI: 10.0591

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05855.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.7e-19	165	252	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 f k++++s+v++ +l lp kf+++h + +++++++lede+g +++ + +++ + l++GW+ F+ +++L++gD++vF+l++ ++f ++ + Dr05855.1 165 FAKAMVRSHVSSCFWLGLPTKFCKDHL-P-PNEFKIVLEDEQGVEYDAIY--IGNRTG--LSGGWRAFAIDHHLEDGDVLVFELIEPDRF--KIYI 252 89*******************9995.3.46789***********..555544..**********************987777..4444 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MENGGKKSSP LFPLSLSLSL SLSLSLSLAF SIMASVENSY EEVRRQRVQE NLKHLKDLGI 60 SDISKSILDS AKSEHKLLRS PSTTRTKKRI EITEVRRSAR ARNHVASYKD EVDLGELKVH 120 RRRYTSSGNN KREYDGRIAS YEEYVRALKR AEKLQTDLKS GQPSFAKAMV RSHVSSCFWL 180 GLPTKFCKDH LPPNEFKIVL EDEQGVEYDA IYIGNRTGLS GGWRAFAIDH HLEDGDVLVF 240 ELIEPDRFKI YIIKACGESN QASDDGNNTD ADAKDTKKSS KKMKSRENSC SSAALVSQKR 300 TTRSSTQGGK AAKNSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	2e-55	B3 family protein

Link Out ? help Back to Top
Ensembl	Dr05855.1