PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr04804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | NF-YC | ||||||||
Protein Properties | Length: 126aa MW: 14317.4 Da PI: 4.7823 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 134.9 | 2.4e-42 | 26 | 102 | 25 | 101 |
NF-YC 25 rikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 ikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa+trtd+fdflvdivpr+e Dr04804.1 26 GIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAITRTDVFDFLVDIVPREEG 102 59************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MCMFYLLLMQ VEDHGPARAW DTSSDGIKKI MKADEDVRMI AAEAPVVFAR ACEMFILELT 60 HRSWAHAEEN KRRTLQKNDI AAAITRTDVF DFLVDIVPRE EGKEDVVPRA LGAPAGDPLS 120 YYYVQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 78 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 8e-49 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr04804.1 |