PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr04197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | GATA | ||||||||
Protein Properties | Length: 202aa MW: 22965.6 Da PI: 10.4799 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.9 | 1.6e-19 | 112 | 146 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk ++ Dr04197.1 112 CSDCRTTKTPLWRSGPQGPKSLCNACGIRQRKARK 146 ********************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSPCRQRYTS LFAIIQVSLP SLNVILFFFF FFKSSLLFPM TSVYSSEDAE QVEQLMISES 60 SIQHGHDHEH TKWMSSKMRL MKKMMNSNQS TSTSKPRRNN SVPESGDVIR VCSDCRTTKT 120 PLWRSGPQGP KSLCNACGIR QRKARKLQSM AMSSDRGHTV PFKKRFKITT TENSAFHPRL 180 LPQDEKEAAI LLMALSCGLL HS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56860.1 | 4e-21 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr04197.1 |